CDS

Accession Number TCMCG075C29384
gbkey CDS
Protein Id XP_007009623.1
Location join(3302617..3302723,3303271..3303310,3303456..3303551,3303964..3304163,3304283..3304354,3304621..3305005)
Gene LOC18586295
GeneID 18586295
Organism Theobroma cacao

Protein

Length 299aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_007009561.2
Definition PREDICTED: serine/arginine-rich splicing factor RS2Z32 isoform X3 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category A
Description Serine arginine-rich splicing factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12896        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
GOs GO:0002244        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0002520        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030097        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0033119        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048024        [VIEW IN EMBL-EBI]
GO:0048025        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048534        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050686        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]
GO:1990825        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCTAGGTATGATGACCGCCGCAGTGGTACTCGCCTTTATGTCGGACACTTGTCTTCAAGGACAAGATCACGTGATCTAGAGGACATGTTTAGCAGATATGGAAGAATACGTGATGTGGATATGAAGCGCGACTATGCATTTGTTGAATTTAGCGACCCTAGAGATGCTGATGATGCAAGATATGCATTGAATGGTCGAGATCTAGATGGAAGCCGTATCATTGTGGAATTCGCCAAGGGAGTGCCCCGTGGCCCAGGTGGATCTCGTGATTACCCTGGAAGAGGAGGACCTACTCCTGGGTCAGGACGCTGCTTCAACTGTGGAATTGATGGTCACTGGGCTCGTGATTGCAAAGCTGGAGATTGGAAGAATAAGTGTTATCGCTGTGGAGAACGAGGCCACATAGAAAGAAATTGTCAAAACAGTCCTAAGAAACTGAGTTACTCACGCTCACCTAGTCCCCGCCGTGGTAGAAGCAGAAGCCGTAGTTACAGCAGGGGGCGTAGCGACAGTCGATCAAGATCACCTGTGAAGAGAGAAAGAAGTTTCGAGCGTGACGATAGAAGATCAAGGAGCCCTAAGCGCCACAGGGGTTCTCCGTCCCCCTCCAAAGGAAGGAAGCATAGTCCAGCACCTGATGAAAGAAGCCCACGAGAGAGAGGTAGCCCTTCTCCAAGAGACCGCAGGCACACCAATGGTTCAGATTACAGTGCAAGTCCTAGGGGAAGGAGCAGAAGCCCTGACCGTGAAGCTGATGTCGAAGGAAGGTCTTATAGGAGCTCTGCGAAGGAAAACGGCCACAGCCGCAGCCCTAGCCCACTCCCTAGGGATGACAGGAGCCCAATCTACGATGATGATGAGAATCATGCTTCTCCTAGGCGCAGTGAATCAAATTAA
Protein:  
MPRYDDRRSGTRLYVGHLSSRTRSRDLEDMFSRYGRIRDVDMKRDYAFVEFSDPRDADDARYALNGRDLDGSRIIVEFAKGVPRGPGGSRDYPGRGGPTPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLSYSRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRERSFERDDRRSRSPKRHRGSPSPSKGRKHSPAPDERSPRERGSPSPRDRRHTNGSDYSASPRGRSRSPDREADVEGRSYRSSAKENGHSRSPSPLPRDDRSPIYDDDENHASPRRSESN